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vega chromatin [23 articles]

Recent papers added to vega library classified by the tag chromatin. You can also see everyone's chromatin.
  • Dynamic Regulation of Nucleosome Positioning in the Human Genome
    Cell, Vol. 132, No. 5. (7 March 2008), pp. 887-898.
    by Dustin E Schones, Kairong Cui, Suresh Cuddapah, Tae-Young Roh, Artem Barski, Zhibin Wang, Gang Wei, Keji Zhao
    posted to sonication sequencing nucleosome epigenetic chromatin bioinformatics by vega on 2008-06-30 15:16:33 as ** along with 7 people mikaelhuss sameetmehta aalibes dchughes sleepingcell idonaldson oelemento
  • An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs)
    Genome Res. (24 June 2008), gr.077479.108.
    by Vardhman Rakyan, Thomas Down, Natalie Thorne, Paul Flicek, Eugene Kulesha, Stefan Graf, Eleni Tomazou, Liselotte Backdahl, Nathan Johnson, Marils Herberth, Kevin Howe, David Jackson, Marcos Miretti, Heike Fiegler, John Marioni, Ewan Birney, Tim Hubbard, Nigel Carter, Simon Tavare, Stephan Beck
    posted to methylation histone chromatin chip bioinformatics by vega on 2008-06-30 15:15:46 as ** along with 1 person rschulz
  • Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions
    Nature (07 May 2008)
    by Lars Guelen, Ludo Pagie, Emilie Brasset, Wouter Meuleman, Marius B Faza, Wendy Talhout, Bert H Eussen, Annelies de Klein, Lodewyk Wessels, Wouter de Laat, Bas van Steensel
    posted to nucleosome epigenetic chromatin by vega on 2008-06-20 06:22:00 as ** along with 1 person rschulz
  • Translational and rotational settings of H2A.Z nucleosomes across the Saccharomycescerevisiae genome
    Nature, Vol. 446, No. 7135., pp. 572-576.
    by Istvan Albert, Travis N Mavrich, Lynn P Tomsho, Ji Qi, Sara J Zanton, Stephan C Schuster, Franklin B Pugh
    posted to nucleosome histone epigenetic chromatin bioinformatics by vega on 2008-06-18 09:56:38 as ** along with 2 people and 1 group cwbrown lusk EisenLab
  • Dynamic Remodeling of Individual Nucleosomes Across a Eukaryotic Genome in Response to Transcriptional Perturbation
    PLoS Biology, Vol. 6, No. 3. (1 March 2008), e65.
    by Sushma Shivaswamy, Akshay Bhinge, Yongjun Zhao, Steven Jones, Martin Hirst, Vishwanath R Iyer
    posted to nucleosome histone epigenetic chromatin bioinformatics by vega on 2008-06-18 09:40:47 as ** along with 2 people djkt lusk
  • DNA Immunoprecipitation (DIP) for the Determination of DNA-Binding Specificity
    Cold Spring Harbor Protocols, Vol. 2008, No. 4. (1 March 2008), pdb.prot4972.
    by Andrea J Gossett, Jason D Lieb
    posted to tfbs chromatin by vega on 2008-06-18 09:40:17 as ** along with 2 people jyuh dacrotty
  • ChIP-Seq Data Reveal Nucleosome Architecture of Human Promoters
    Cell, Vol. 131, No. 5. (30 November 2007), pp. 831-832.
    by Christoph D Schmid, Philipp Bucher
    posted to nucleosome histone chromatin bioinformatics by vega on 2008-06-18 09:31:20 as ** along with 1 person mikaelhuss
  • A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning
    Genome Res. (13 May 2008), gr.076463.108.
    by Anton Valouev, Jeffrey Ichikawa, Thaisan Tonthat, Jeremy Stuart, Swati Ranade, Heather Peckham, Kathy Zeng, Joel A Malek, Gina Costa, Kevin Mckernan, Arend Sidow, Andrew Fire, Steven M Johnson
    posted to histone epigenetic chromatin bioinformatics by vega on 2008-06-13 04:07:54 as ** along with 5 people and 1 group caseybrown aalibes Stew dpollard maximilianh RockmanLab
  • A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome
    Genome Res. (12 June 2008), gr.078261.108.
    by Travis N Mavrich, Ilya P Ioshikhes, Bryan J Venters, Cizhong Jiang, Lynn P Tomsho, Ji Qi, Stephan C Schuster, Istvan Albert, Franklin B Pugh
    posted to histone epigenetic chromatin bioinformatics by vega on 2008-06-13 04:06:08 as *** along with 1 person aalibes
  • An intact histone 3'-processing site is required for transcription termination in a mouse histone H2a gene.
    Molecular and cellular biology, Vol. 11, No. 1. (January 1991), pp. 497-509.
    by N Chodchoy, NB Pandey, WF Marzluff
    posted to transcription-termination histone epigenetic chromatin by vega on 2008-05-15 10:27:58 as **
  • 3' Processing and termination of mouse histone transcripts synthesized in vitro by RNA polymerase II
    Nucl. Acids Res., Vol. 24, No. 19. (1 October 1996), pp. 3797-3805.
    by X Gu, WF Marzluff
    posted to transcription-termination histone epigenetic chromatin by vega on 2008-05-15 09:32:11 as **
  • Transcription termination and 3' processing: the end is in site!
    Cell, Vol. 41, No. 2. (June 1985), pp. 349-359.
    by ML Birnstiel, M Busslinger, K Strub
    posted to transcription-termination epigenetic chromatin by vega on 2008-05-15 09:30:17 as **
  • The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.
    Nature, Vol. 432, No. 7016. (25 November 2004), pp. 517-522.
    by M Kim, NJ Krogan, L Vasiljeva, OJ Rando, E Nedea, JF Greenblatt, S Buratowski
    posted to transcription-termination epigenetic chromatin by vega on 2008-05-15 09:25:39 as **
  • Human 5' --> 3' exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sites.
    Nature, Vol. 432, No. 7016. (25 November 2004), pp. 522-525.
    by S West, N Gromak, NJ Proudfoot
    posted to transcription-termination epigenetic chromatin by vega on 2008-05-15 09:22:57 as ** along with 1 person lesander
  • Autocatalytic RNA cleavage in the human [beta]-globin pre-mRNA promotes transcription termination
    Nature, Vol. 432, No. 7016. (25 November 2004), pp. 526-530.
    by Alexandre Teixeira, Abdessamad Tahiri-Alaoui, Steve West, Benjamin Thomas, Aroul Ramadass, Igor Martianov, Mick Dye, William James, Nick J Proudfoot, Alexandre Akoulitchev
    posted to transcription-termination epigenetic chromatin by vega on 2008-05-15 09:22:00 as **
  • Chromatin structure and evolution in the human genome
    BMC Evolutionary Biology, Vol. 7 (09 May 2007), 72.
    by James GD Prendergast, Harry Campbell, Nick Gilbert, Malcolm G Dunlop, Wendy A Bickmore, Colin AM Semple
    posted to evolution chromatin by vega on 2008-04-25 06:32:30 as **
  • Easy detection of chromatin binding proteins by the histone association assay
    Biological Procedures Online, Vol. 7 (2005), pp. 60-69.
    by Robin Ricke, Anja-Katrin Bielinsky
    posted to sonication chromatin by vega on 2008-04-25 03:01:44 as **
  • Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
    Nature (01 July 2007)
    by Tarjei S Mikkelsen, Manching Ku, David B Jaffe, Biju Issac, Erez Lieberman, Georgia Giannoukos, Pablo Alvarez, William Brockman, Tae-Kyung Kim, Richard P Koche, William Lee, Eric Mendenhall, Aisling O’donovan, Aviva Presser, Carsten Russ, Xiaohui Xie, Alexander Meissner, Marius Wernig, Rudolf Jaenisch, Chad Nusbaum, Eric S Lander, Bradley E Bernstein
    posted to chromatin by vega on 2008-04-22 10:22:29 as ** along with 13 people and 1 group inesdesantiago jasonflannick jyuh brant dchughes kengg vplagnol olympos epigenetics bioyang cabbagezs rschulz slevy03 EisenLab
  • Genome-wide approaches to studying chromatin modifications
    Nat Rev Genet, Vol. 9, No. 3. (March 2008), pp. 179-191.
    by Dustin E Schones, Keji Zhao
    posted to chip chromatin review survey by vega on 2008-04-07 08:15:29 as ** along with 8 people bpcusack jyuh tmmurali dchughes zwang cabbagezs idonaldson faion
  • EPIGENOMICS: BEYOND CPG ISLANDS
    Nat Rev Genet, Vol. 5, No. 6. (June 2004), pp. 446-455.
    by Melissa J Fazzari, John M Greally
    posted to chromatin by vega on 2008-04-07 08:09:18 as ** along with 2 people rdiaz olympos
  • Cyclical DNA methylation of a transcriptionally active promoter
    Nature, Vol. 452, No. 7183. (6 March 2008), pp. 45-50.
    by Raphael Metivier, Rozenn Gallais, Christophe Tiffoche, Christine Le Peron, Renata Z Jurkowska, Richard P Carmouche, David Ibberson, Peter Barath, Florence Demay, George Reid, Vladimir Benes, Albert Jeltsch, Frank Gannon, Gilles Salbert
    posted to chromatin tfbs by vega on 2008-03-06 10:38:31 as ** along with 3 people djkt epigenetics clearbluespring
  • Transient cyclical methylation of promoter DNA
    Nature, Vol. 452, No. 7183. (6 March 2008), pp. 112-115.
    by Sara Kangaspeska, Brenda Stride, Raphael Metivier, Maria Polycarpou-Schwarz, David Ibberson, Richard P Carmouche, Vladimir Benes, Frank Gannon, George Reid
    posted to chromatin tfbs by vega on 2008-03-06 10:38:18 as ** along with 4 people djkt maximilianh clearbluespring dunnp
  • High-throughput mapping of the chromatin structure of human promoters
    Nat Biotech, Vol. 25, No. 2. (February 2007), pp. 244-248.
    by Fatih Ozsolak, Jun S Song, Shirley X Liu, David E Fisher
    posted to chromatin tfbs by vega on 2008-03-03 02:15:19 as ** along with 5 people and 2 groups jyuh aalibes jfr dchughes ccr G4ID Genetics-of-Gambling
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