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vlachmore gene [17 articles]

Recent papers added to vlachmore library classified by the tag gene. You can also see everyone's gene.
  • Normalizing biomedical terms by minimizing ambiguity and variability
    BMC Bioinformatics, Vol. 9, No. Suppl 3. (2008)
    by Yoshimasa Tsuruoka, John Mcnaught, Sophia Ananiadou
    posted to rules normalization gene bionlp by vlachmore on 2008-05-09 15:33:01 as ** along with 2 people satre dullhunk
  • BANNER: an executable survey of advances in biomedical named entity recognition.
    Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2008), pp. 652-663.
    posted to recognition ner named name gene entity crf bionlp by vlachmore on 2008-05-09 14:25:32 as **
  • Me and my friends: gene mention normalization with background knowledge
    by Jörg Hakenberg, Loic Royer, Conrad Plake, Hendrik Strobelt, Michael Schroeder
    posted to bionlp context gene normalization ranking by vlachmore on 2007-12-19 13:48:49 as *****
  • Human gene name normalization using text matching with automatically extracted synonym dictionaries
    (2006), pp. 41-48.
    by Haw-Ren Fang, Kevin Murphy, Yang Jin, Jessica Kim, Peter White
    posted to bionlp gene name normalization by vlachmore on 2007-12-17 18:34:31 as read
  • A Graph-Search Framework for GeneId Ranking (Extended Abstract)
    (2006)
    by William W Cohen
    posted to bionlp gene graph normalization by vlachmore on 2007-12-17 18:31:57 as **
  • A graph-search framework for associating gene identifiers with documents
    BMC Bioinformatics, Vol. 7 (10 October 2006), 440.
    by William W Cohen, Einat Minkov
    posted to algorithm bionlp gene graph normalization by vlachmore on 2007-12-17 18:23:17 as ****
  • Gene clustering by Latent Semantic Indexing of MEDLINE abstracts
    Bioinformatics, Vol. 21, No. 1., 104.
    by Ramin Homayouni, Kevin Heinrich, Lai Wei, Michael W Berry
  • Weakly Supervised Learning Methods for Improving the Quality of Gene Name Normalization Data
    (2005)
    by Ben Wellner
    posted to bionlp gene normalization semi-supervised by vlachmore on 2007-12-17 17:51:03 as **
  • Background and overview for KDD Cup 2002 task 1: information extraction from biomedical articles
    SIGKDD Explor. Newsl., Vol. 4, No. 2. (December 2002), pp. 87-89.
    by Alexander Yeh, Lynette Hirschman, Alexander Morgan
  • Evaluating the automatic mapping of human gene and protein mentions to unique identifiers.
    (2007)
    by AA Morgan, B Wellner, JB Colombe, R Arens, ME Colosimo, L Hirschman
    posted to bionlp gene normalization by vlachmore on 2007-12-17 17:03:37 as ****
  • Data preparation and interannotator agreement: BioCreAtIvE task 1B.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by ME Colosimo, AA Morgan, AS Yeh, JB Colombe, L Hirschman
  • Learning string similarity measures for gene/protein name dictionary look-up using logistic regression.
    Bioinformatics (12 August 2007)
    by Yoshimasa Tsuruoka, John McNaught, Jun'ichi Tsujii, Sophia Ananiadou
  • Bootstrapping the recognition and anaphoric linking of named entities in Drosophila articles.
    Pac Symp Biocomput (2006), pp. 100-111.
  • Overview of BioCreAtIvE task 1B: normalized gene lists.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
  • Gene name extraction using FlyBase resources
    (2003), pp. 1-8.
    by Alex Morgan, Lynette Hirschman, Alexander Yeh, Marc Colosimo
  • Extracting the names of genes and gene products with a hidden Markov model
    (2000), pp. 201-207.
    by Nigel Collier, Chikashi Nobata, Jun-Ichi Tsujii
    posted to entity gene hmm named recognition by vlachmore on 2007-10-04 18:09:49 as **
  • Using BLAST for identifying gene and protein names in journal articles
    Gene, Vol. 259, No. 1-2. (23 December 2000), pp. 245-252.
    by Michael Krauthammer, Andrey Rzhetsky, Pavel Morozov, Carol Friedman
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