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westoll library [105 articles]

Статьи, недавно добавленные в библиотеку westoll .
  • The fluxes through glycolytic enzymes in Saccharomyces cerevisiae are predominantly regulated at posttranscriptional levels
    Proceedings of the National Academy of Sciences, Vol. 104, No. 40. (2 October 2007), pp. 15753-15758.
    by Pascale Daran-Lapujade, Sergio Rossell, Walter M van Gulik, Marijke A Luttik, Marco J de Groot, Monique Slijper, Albert J Heck, Jean-Marc Daran, Johannes H de Winde, Hans V Westerhoff, Jack T Pronk, Barbara M Bakker
    posted to regulation-analysis by westoll on 2008-06-12 21:36:35 as ** along with 1 person fishtank
  • Unraveling the complexity of flux regulation: A new method demonstrated for nutrient starvation in Saccharomyces cerevisiae
    Proceedings of the National Academy of Sciences, Vol. 103, No. 7. (14 February 2006), pp. 2166-2171.
    by Sergio Rossell, Coen C van der Weijden, Alexander Lindenbergh, Arjen van Tuijl, Christof Francke, Barbara M Bakker, Hans V Westerhoff
    posted to regulation-analysis by westoll on 2008-06-09 14:48:30 as ** along with 1 person and 1 group athleem JJJ
  • Experimental and in Silico Analyses of Glycolytic Flux Control in Bloodstream Form Trypanosoma brucei
    J. Biol. Chem., Vol. 280, No. 31. (5 August 2005), pp. 28306-28315.
    by Marie-Astrid Albert, Jurgen R Haanstra, Veronique Hannaert, Joris Van Roy, Fred R Opperdoes, Barbara M Bakker, Paul A Michels
    posted to trypanosome kinetic-model glycolysis by westoll on 2008-05-09 15:16:55 as **
  • Protein phosphorylation can regulate metabolite concentrations rather than control flux: the example of glycogen synthase.
    Proc Natl Acad Sci U S A, Vol. 101, No. 6. (10 February 2004), pp. 1485-1490.
    by JR Schafer, DA Fell, D Rothman, RG Shulman
    posted to homeostasis by westoll on 2008-04-21 19:40:59 as ** along with 1 person jyuh
  • Model of 2,3-bisphosphoglycerate metabolism in the human erythrocyte based on detailed enzyme kinetic equations: in vivo kinetic characterization of 2,3-bisphosphoglycerate synthase/phosphatase using 13C and 31P NMR.
    The Biochemical journal, Vol. 342 Pt 3 (15 September 1999), pp. 567-580.
    by PJ Mulquiney, WA Bubb, PW Kuchel
    posted to erythrocyte kinetic-model by westoll on 2008-04-17 19:57:46 as **
  • Model of 2,3-bisphosphoglycerate metabolism in the human erythrocyte based on detailed enzyme kinetic equations: computer simulation and metabolic control analysis.
    The Biochemical journal, Vol. 342 Pt 3 (15 September 1999), pp. 597-604.
    by PJ Mulquiney, PW Kuchel
    posted to erythrocyte kinetic-model by westoll on 2008-04-17 19:57:35 as **
  • Systems biology of the human red blood cell
    Blood Cells, Molecules, and Diseases, Vol. 36, No. 2. ( 2006), pp. 239-247.
    by Neema Jamshidi, Bernhard Palsson
    posted to erythrocyte kinetic-model by westoll on 2008-04-17 17:19:33 as ** along with 1 person calvin
  • Futile cycles in Saccharomyces cerevisiae strains expressing the gluconeogenic enzymes during growth on glucose.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 90, No. 4. (15 February 1993), pp. 1290-1294.
    by MA Navas, S Cerdán, JM Gancedo
    posted to scerevisiae by westoll on 2008-04-07 12:12:07 as **
  • Evolution in Saccharomyces cerevisiae: Identification of Mutations Increasing Fitness in Laboratory Populations
    Genetics, Vol. 165, No. 3. (1 November 2003), pp. 975-983.
    by Victoria M Blanc, Julian Adams
    posted to lab-evolution by westoll on 2008-04-04 12:42:50 as **
  • Experimental evolution with yeast
    FEMS Yeast Research, Vol. 6, No. 5. (2006), pp. 685-691.
    by Clifford Zeyl
    posted to lab-evolution by westoll on 2008-04-04 12:40:22 as **
  • Characteristic genome rearrangements in experimental evolution of Saccharomycescerevisiae
    Proceedings of the National Academy of Sciences, Vol. 99, No. 25. (10 December 2002), pp. 16144-16149.
    by Maitreya J Dunham, Hassan Badrane, Tracy Ferea, Julian Adams, Patrick O Brown, Frank Rosenzweig, David Botstein
    posted to lab-evolution by westoll on 2008-04-04 12:29:35 as **
  • Sensors of extracellular nutrients in Saccharomyces cerevisiae
    Current Genetics, Vol. 40, No. 2. (2001), pp. 91-109.
    by Hanna Forsberg, Per Ljungdahl
    posted to nutrient-sensing by westoll on 2008-04-04 09:44:20 as **
  • Glucose-sensing and -signalling mechanisms in yeast
    FEMS Yeast Research, Vol. 2, No. 2. (2002), pp. 183-201.
    by Filip Rolland, Joris Winderickx, Johan M Thevelein
    posted to nutrient-sensing by westoll on 2008-04-04 09:43:30 as **
  • Reserve carbohydrates metabolism in the yeast Saccharomyces cerevisiae
    FEMS Microbiology Reviews, Vol. 25, No. 1. (2001), pp. 125-145.
    by Jean Francois, Jean L Parrou
    posted to nongrowing scerevisiae by westoll on 2008-04-02 09:51:55 as **
  • Metabolically engineered bacteria for producing hydrogen via fermentation
    Microbial Biotechnology, Vol. 1, No. 2. (2008), pp. 107-125.
    by Gonul V Schara, Toshinari Maeda, Thomas K Wood
    posted to biofuel by westoll on 2008-03-29 11:47:32 as **
  • In the beginning, there was the cell: cellular homeostasis
    Advan. Physiol. Edu., Vol. 28, No. 4. (1 December 2004), pp. 135-138.
    by Michael F Romero
    posted to homeostasis by westoll on 2008-03-28 10:42:45 as **
  • Evolution experiments with microorganisms: the dynamics and genetic bases of adaptation.
    Nat Rev Genet, Vol. 4, No. 6. (June 2003), pp. 457-469.
    by SF Elena, RE Lenski
    posted to lab-evolution by westoll on 2008-03-27 15:14:10 as ** along with 3 people and 1 group ryang kinestetika evodeva microbiology_nijmegen
  • The distribution and genetic structure of Escherichia coli in Australian vertebrates: host and geographic effects
    Microbiology, Vol. 149, No. 12. (1 December 2003), pp. 3575-3586.
    by David M Gordon, Ann Cowling
    posted to ecoli niche by westoll on 2008-03-27 14:26:32 as **
  • Long-term experimental evolution in Escherichia coli. X. Quantifying the fundamental and realized niche
    BMC Evolutionary Biology, Vol. 2, No. 1. (2002)
    by Vaughn Cooper
    posted to lab-evolution niche by westoll on 2008-03-27 14:20:47 as **
  • Metabolic model integration of the bibliome, genome, metabolome and reactome of Aspergillus niger
    Mol Syst Biol, Vol. 4 (25 March 2008)
    by Mikael R Andersen, Michael L Nielsen, Jens Nielsen
    posted to genome-scale structural-model by westoll on 2008-03-27 07:25:29 as **
  • Reconstruction and validation of Saccharomyces cerevisiae iND750, a fully compartmentalized genome-scale metabolic model.
    Genome Res, Vol. 14, No. 7. (July 2004), pp. 1298-1309.
    by NC Duarte, MJ Herrgård, BØ Palsson
    posted to genome-scale structural-model by westoll on 2008-03-27 07:25:01 as ** along with 2 people RMGraze edwardmorrissey
  • The regulatory principles of glycolysis in erythrocytes in vivo and in vitro. A minimal comprehensive model describing steady states, quasi-steady states and time-dependent processes.
    Biochem J, Vol. 154, No. 2. (15 February 1976), pp. 449-469.
    by TA Rapoport, R Heinrich, SM Rapoport
    posted to erythrocyte glycolysis kinetic-model by westoll on 2008-03-25 07:37:53 as **
  • Specific ethanol production rate in ethanologenic Escherichia coli strain KO11 Is limited by pyruvate decarboxylase.
    J Mol Microbiol Biotechnol, Vol. 15, No. 1. (2008), pp. 55-64.
    by G Huerta-Beristain, J Utrilla, G Hernández-Chávez, F Bolívar, G Gosset, A Martinez
    posted to metabolic-engineering by westoll on 2008-03-25 07:19:25 as **
  • Coenzyme A affects firefly luciferase luminescence because it acts as a substrate and not as an allosteric effector
    FEBS Journal, Vol. 272, No. 20. (2005), pp. 5206-5216.
    by Hugo Fraga, Diogo Fernandes, Rui Fontes, Joaquim
    posted to luciferase by westoll on 2008-03-13 08:39:52 as **
  • Use of Firefly Luciferase for ATP Measurement: Other Nucleotides Enhance Turnover
    Journal of Bioluminescence and Chemiluminescence, Vol. 11, No. 3. (1996), pp. 149-167.
    by Sharon R Ford, Kelly H Chenault, Lori S Bunton, Ginger J Hampton, John Mccarthy, Marliese S Hall, Samuel J Pangburn, Lys M Buck, Franklin R Leach
    posted to luciferase by westoll on 2008-03-12 18:51:09 as **
  • ADP is produced by firefly luciferase but its synthesis is independent of the light emitting properties
    Biochimie, Vol. 83, No. 6. (June 2001), pp. 523-528.
    by Kyung-Lyum Min, Jean-Paul Steghens
    posted to luciferase by westoll on 2008-03-12 18:40:26 as **
  • Formulating genome-scale kinetic models in the post-genome era
    Mol Syst Biol, Vol. 4 (4 March 2008)
    by Neema Jamshidi, Bernhard O Palsson
    posted to erythrocyte glycolysis kinetic-model by westoll on 2008-03-06 13:22:50 as ** along with 1 person fishtank
  • Modularity defined
    Mol Syst Biol, Vol. 4 (12 February 2008)
    by Herbert M Sauro
    posted to modularity by westoll on 2008-03-06 13:02:34 as ** along with 1 person rsantana
  • Predicting synthetic rescues in metabolic networks
    Mol Syst Biol, Vol. 4 (12 February 2008)
    by Adilson E Motter, Natali Gulbahce, Eivind Almaas, Albert-Laszlo Barabasi
    posted to essentiality fba by westoll on 2008-03-06 12:52:14 as ** along with 9 people tmmurali debasis kentsis zwang bootsy biomcgary cabbagezs shikin shung
  • In vivo dynamics of galactose metabolism in Saccharomyces cerevisiae: metabolic fluxes and metabolite levels.
    Biotechnol Bioeng, Vol. 73, No. 5. (5 June 2001), pp. 412-425.
    by S Ostergaard, L Olsson, J Nielsen
    posted to axp c-source scerevisiae by westoll on 2008-03-04 10:46:13 as **
  • In vivo analysis of metabolic dynamics in <I>Saccharomyces cerevisiae</I> : I. Experimental observations
    Biotechnology and Bioengineering, Vol. 55, No. 2. (1997), pp. 305-316.
    by Uwe Theobald, Werner Mailinger, Michael Baltes, Manfred Rizzi, Matthias Reuss
    posted to axp sampling by westoll on 2008-03-04 10:40:41 as **
  • Transient increase of ATP as a response to temperature up-shift in Escherichia coli
    Microbial Cell Factories, Vol. 4, No. 1. (2005)
    by Jaakko Soini, Christina Falschlehner, Christina Mayer, Daniela Bohm, Stefan Weinel, Johanna Panula, Antti Vasala, Peter Neubauer
    posted to axp temperature by westoll on 2008-03-04 10:33:07 as **
  • Relationship between Growth Rate and ATP Concentration in Escherichia coli: A BIOASSAY FOR AVAILABLE CELLULAR ATP
    J. Biol. Chem., Vol. 279, No. 9. (27 February 2004), pp. 8262-8268.
    by David A Schneider, Richard L Gourse
    posted to atp ecoli growth sampling by westoll on 2008-03-03 14:15:23 as **
  • Invariance of the Nucleoside Triphosphate Pools of Escherichia coli with Growth Rate
    J. Biol. Chem., Vol. 275, No. 6. (11 February 2000), pp. 3931-3935.
    by Carsten Petersen, Lisbeth B Moller
    posted to atp ecoli growth by westoll on 2008-03-03 14:13:35 as **
  • Glycolysis and the regulation of glucose transport in Lactococcus lactis spp. lactis in batch and fed-batch culture
    Microbial Cell Factories, Vol. 6 (24 May 2007), 16.
    by Maria Papagianni, Nicholaos Avramidis, George Filiousis
    posted to axp growth llactis by westoll on 2008-02-28 13:46:16 as **
  • Metabolic networks in motion: 13C-based flux analysis
    Mol Syst Biol, Vol. 2 (14 November 2006)
    by Uwe Sauer
    posted to flux-analysis by westoll on 2008-02-28 08:37:14 as ** along with 2 people and 1 group JeremyZucker fishtank MetabolicModeling
  • Full-scale model of glycolysis in Saccharomyces cerevisiae
    Biophysical Chemistry, Vol. 94, No. 1-2. (11 December 2001), pp. 121-163.
    by F Hynne, S Dano, PG Sorensen
    posted to scerevisiae glycolysis kinetic-model by westoll on 2008-02-26 14:48:58 as ** along with 1 person pmendes
  • Carbon Starvation Can Induce Energy Deprivation and Loss of Fermentative Capacity in Saccharomyces cerevisiae
    Appl. Environ. Microbiol., Vol. 69, No. 6. (1 June 2003), pp. 3251-3257.
    by Elisabeth Thomsson, Christer Larsson, Eva Albers, Annika Nilsson, Carl J Franzen, Lena Gustafsson
    posted to ferm-capacity nongrowing by westoll on 2008-02-25 13:58:36 as **
  • Revised procedures for yeast metabolites extraction: application to a glucose pulse to carbon-limited yeast cultures, which reveals a transient activation of the purine salvage pathway
    Yeast, Vol. 24, No. 1. (2007), pp. 47-60.
    by Marie O Loret, Lene Pedersen, Jean François
    posted to scerevisiae analysis axp sampling by westoll on 2008-02-18 12:54:15 as **
  • Cold glycerol-saline: The promising quenching solution for accurate intracellular metabolite analysis of microbial cells
    Analytical Biochemistry, Vol. 370, No. 1. (1 November 2007), pp. 87-97.
    by Silas G Villas-Boas, Per Bruheim
    posted to scerevisiae metabolomics sampling by westoll on 2008-02-18 12:51:39 as **
  • Metabolomics or metabolite profiles?
    Trends Biotechnol, Vol. 23, No. 8. (August 2005), pp. 385-386.
    by SG Villas-Bôas, S Rasmussen, GA Lane
    posted to metabolomics by westoll on 2008-02-18 12:35:55 as ** along with 2 people and 1 group irenas daniel_schober dbk-lab
  • Global metabolite analysis of yeast: evaluation of sample preparation methods
    Yeast, Vol. 22, No. 14. (2005), pp. 1155-1169.
    by Silas G Villas-Bôas, Jesper Højer-Pedersen, Mats Åkesson, Jørn Smedsgaard, Jens Nielsen
    posted to scerevisiae metabolomics sampling by westoll on 2008-02-18 12:33:29 as ** along with 1 person jiny
  • Nucleotide pools of growing, synchronized and stressed cultures of Saccharomyces cerevisiae.
    Arch Microbiol, Vol. 135, No. 1. (August 1983), pp. 63-67.
    by G Ditzelmüller, W Wöhrer, CP Kubicek, M Röhr
    posted to axp growth scerevisiae by westoll on 2008-02-18 09:30:23 as **
  • Microbial metabolomics: toward a platform with full metabolome coverage.
    Anal Biochem, Vol. 370, No. 1. (1 November 2007), pp. 17-25.
    by MJ van der Werf, KM Overkamp, B Muilwijk, L Coulier, T Hankemeier
    posted to metabolomics by westoll on 2008-02-18 09:05:23 as **
  • Effect of hxk2 deletion and HAP4 overexpression on fermentative capacity in Saccharomyces cerevisiae
    FEMS Yeast Research, Vol. 8, No. 2. (2008), pp. 195-203.
    by Jasper M Schuurmans, Sergio L Rossell, Arjen van Tuijl, Barbara M Bakker, Klaas J Hellingwerf, Maarten
    posted to ferm-capacity by westoll on 2008-02-18 08:58:53 as **
  • Characterization of Nucleotide Pools as a Function of Physiological State in Escherichia coli
    J. Bacteriol., Vol. 190, No. 2. (15 January 2008), pp. 718-726.
    by Michael H Buckstein, Jian He, Harvey Rubin
    posted to adenylates sampling by westoll on 2008-02-15 13:39:38 as **
  • Transcription Regulation by Initiating NTP Concentration: rRNA Synthesis in Bacteria
    Science, Vol. 278, No. 5346. (19 December 1997), pp. 2092-2097.
    by Tamas Gaal, Michael S Bartlett, Wilma Ross, Charles L Turnbough, Richard L Gourse
    posted to atp ecoli growth by westoll on 2008-02-15 10:35:23 as **
  • When transcriptome meets metabolome: fast cellular responses of yeast to sudden relief of glucose limitation
    Mol Syst Biol, Vol. 2 (2006)
    by MTAP Kresnowati, WA van Winden, MJH Almering, A Proell, C Ras, TA Knijnenburg, PAS Daran-Lapujade, JT Pronk, JJ Heijnen, JM Daran
    posted to metabolomics scerevisiae by westoll on 2008-02-15 09:50:59 as ** along with 2 people alexg yyin02
  • Fermentative capacity after cold storage of baker's yeast is dependent on the initial physiological state but not correlated to the levels of glycolytic enzymes
    International Journal of Food Microbiology, Vol. 71, No. 2-3. (30 December 2001), pp. 111-124.
    by A Nilsson, J Norbeck, R Oelz, A Blomberg, L Gustafsson
    posted to ferm-capacity nongrowing by westoll on 2008-01-18 11:07:12 as **
  • The catabolic capacity of Saccharomyces cerevisiae is preserved to a higher extent during carbon compared to nitrogen starvation
    Yeast, Vol. 18, No. 15. (2001), pp. 1371-1381.
    by Annika Nilsson, Inga-Lill Påhlman, Per-Åke Jovall, Anders Blomberg, Christer Larsson, Lena Gustafsson
    posted to ferm-capacity nongrowing by westoll on 2008-01-18 10:41:44 as **
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