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xingxu genomics [48 articles]

Recent papers added to xingxu library classified by the tag genomics. You can also see everyone's genomics.
  • Are Rare Variants Responsible for Susceptibility to Complex Diseases
    The American Journal of Human Genetics, Vol. 69, No. 1. (July 2001), pp. 124-137.
    by Jonathan K Pritchard
    posted to review opinion genomics by xingxu on 2008-07-17 15:51:36 as ** along with 1 person caseybrown
  • Genome-wide association studies for complex traits: consensus, uncertainty and challenges
    Nature Reviews Genetics, Vol. 9, No. 5., pp. 356-369.
    by Mark I Mccarthy, Gonçalo R Abecasis, Lon R Cardon, David B Goldstein, Julian Little, John PA Ioannidis, Joel N Hirschhorn
    posted to review prospective gwa genomics by xingxu on 2008-07-08 16:07:02 as ** along with 6 people ptrobajo echinotrix vplagnol aconesa jyuh jonsta247
  • Heritability in the genomics era — concepts and misconceptions
    Nature Reviews Genetics, Vol. 9, No. 4. (04 March 2008), pp. 255-266.
    by Peter M Visscher, William G Hill, Naomi R Wray
    posted to review population heritability genomics by xingxu on 2008-05-19 16:31:50 as ** along with 6 people kndiaye jyuh dchughes Ayest ggorjan jo_davies
  • Analysis of genetic variation in Ashkenazi Jews by high density SNP genotyping
    BMC Genetics, Vol. 9 (05 February 2008), 14.
    by Adam B Olshen, Bert Gold, Kirk E Lohmueller, Jeffrey P Struewing, Jaya Satagopan, Stefan A Stefanov, Eleazar Eskin, Tomas Kirchhoff, James A Lautenberger, Robert J Klein, Eitan Friedman, Larry Norton, Nathan A Ellis, Agnes Viale, Catherine S Lee, Patrick I Borgen, Andrew G Clark, Kenneth Offit, Jeff Boyd
    posted to substructure population linkage gwa genomics ashkenazi by xingxu on 2008-05-15 17:37:37 as ** along with 1 person Archaeogenetics
  • Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome.
    Cell, Vol. 128, No. 6. (23 March 2007), pp. 1231-1245.
    by TH Kim, ZK Abdullaev, AD Smith, KA Ching, DI Loukinov, RD Green, MQ Zhang, VV Lobanenkov, B Ren
    posted to insulator genomics ctcf by xingxu on 2008-05-15 17:33:00 as ** along with 2 people sebastien_vigneau rschulz
  • REPLICATION AND TRANSCRIPTION: SHAPING THE LANDSCAPE OF THE GENOME
    Nat Rev Genet, Vol. 6, No. 9. (2005), pp. 669-677.
    by Lyubomira Chakalova, Emmanuel Debrand, Jennifer A Mitchell, Cameron S Osborne, Peter Fraser
    posted to transcriptome long_range genomics by xingxu on 2008-05-05 20:42:02 as ** along with 4 people and 2 groups bala xico gloria margaritis WetBiology DictyosteliumGroup
  • Genomics and Biology Come Together to Fight HIV
    PLoS Biology, Vol. 6, No. 3. (1 March 2008), e76.
    by David B Goldstein
    posted to genomics gwa hiv review by xingxu on 2008-04-17 13:28:01 as **
  • Geographic patterns of genome admixture in Latin American Mestizos.
    PLoS genetics, Vol. 4, No. 3. (March 2008)
    by S Wang, N Ray, W Rojas, MV Parra, G Bedoya, C Gallo, G Poletti, G Mazzotti, K Hill, AM Hurtado, B Camrena, H Nicolini, W Klitz, R Barrantes, JA Molina, NB Freimer, MC Bortolini, FM Salzano, ML Petzl-Erler, LT Tsuneto, JE Dipierri, EL Alfaro, G Bailliet, NO Bianchi, E Llop, F Rothhammer, L Excoffier, A Ruiz-Linares
    posted to admixture genomics latino by xingxu on 2008-04-17 12:50:53 as **
  • Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori.
    Nature, Vol. 397, No. 6715. (14 January 1999), pp. 176-180.
    by RA Alm, LS Ling, DT Moir, BL King, ED Brown, PC Doig, DR Smith, B Noonan, BC Guild, BL deJonge, G Carmel, PJ Tummino, A Caruso, M Uria-Nickelsen, DM Mills, C Ives, R Gibson, D Merberg, SD Mills, Q Jiang, DE Taylor, GF Vovis, TJ Trust
    posted to genomics historical pylori by xingxu on 2008-04-03 09:07:04 as ** along with 1 person bjorns
  • The complete genome sequence of the gastric pathogen Helicobacter pylori.
    Nature, Vol. 388, No. 6642. (7 August 1997), pp. 539-547.
    by JF Tomb, O White, AR Kerlavage, RA Clayton, GG Sutton, RD Fleischmann, KA Ketchum, HP Klenk, S Gill, BA Dougherty, K Nelson, J Quackenbush, L Zhou, EF Kirkness, S Peterson, B Loftus, D Richardson, R Dodson, HG Khalak, A Glodek, K McKenney, LM Fitzegerald, N Lee, MD Adams, JC Venter
    posted to genomics pylori sequencing by xingxu on 2008-03-19 23:53:19 as ** along with 2 people evaf bjorns
  • A multidimensional analysis of genes mutated in breast and colorectal cancers
    Genome Res. (10 August 2007), gr.6431107.
    by Jimmy Lin, Christine M Gan, Xiaosong Zhang, Sian Jones, Tobias Sjoblom, Laura D Wood, Williams D Parsons, Nickolas Papadopoulos, Kenneth W Kinzler, Bert Vogelstein, Giovanni Parmigiani, Victor E Velculescu
    posted to breast colon genomics somatic by xingxu on 2008-02-28 22:01:18 as ** along with 2 people jfr cerami
  • Systematic analyses of the cancer genome: lessons learned from sequencing most of the annotated human protein-coding genes.
    Curr Opin Oncol, Vol. 20, No. 1. (January 2008), pp. 66-71.
    by T Sjöblom
    posted to cancer genomics review somatic by xingxu on 2008-02-28 22:00:41 as ** along with 1 person cerami
  • Gene Network Inference via Structural Equation Modeling in Genetical Genomics Experiments.
    Genetics (3 February 2008)
    by Bing Liu, Alberto de la Fuente, Ina Hoeschele
    posted to epistasis genomics modeling by xingxu on 2008-02-24 03:01:20 as ** along with 5 people and 1 group caseybrown jyuh dpollard raiyar smgomez EisenLab
  • Worldwide Human Relationships Inferred from Genome-Wide Patterns of Variation
    Science, Vol. 319, No. 5866. (22 February 2008), pp. 1100-1104.
    by Jun Z Li, Devin M Absher, Hua Tang, Audrey M Southwick, Amanda M Casto, Sohini Ramachandran, Howard M Cann, Gregory S Barsh, Marcus Feldman, Luigi L Cavalli-Sforza, Richard M Myers
    posted to genomics history human_diversity human_genetics population by xingxu on 2008-02-24 02:57:08 as ***** along with 10 people Archaeogenetics adacier cgravlee echinotrix EsepBib ramensky zwang qwermish mailund Dorkins
  • Discerning the Ancestry of European Americans in Genetic Association Studies
    PLoS Genetics, Vol. 4, No. 1. (1 January 2008), e236.
    by Alkes L Price, Johannah Butler, Nick Patterson, Cristian Capelli, Vincenzo L Pascali, Francesca Scarnicci, Andres Ruiz-Linares, Leif Groop, Angelica A Saetta, Penelope Korkolopoulou, Uri Seligsohn, Alicja Waliszewska, Christine Schirmer, Kristin Ardlie, Alexis Ramos, James Nemesh, Lori Arbeitman, David B Goldstein, David Reich, Joel N Hirschhorn
    posted to caucasians genomics gwa population substructure by xingxu on 2008-02-21 23:04:02 as ** along with 1 person and 1 group brant Computational-Genomics
  • Analysis and Application of European Genetic Substructure Using 300 K SNP Information
    PLoS Genetics, Vol. 4, No. 1. (1 January 2008), e4.
    by Chao Tian, Robert M Plenge, Michael Ransom, Annette Lee, Pablo Villoslada, Carlo Selmi, Lars Klareskog, Ann E Pulver, Lihong Qi, Peter K Gregersen, Michael F Seldin
    posted to caucasians genomics population substructure by xingxu on 2008-02-21 23:03:03 as ** along with 1 group Computational-Genomics
  • Confidence in comparative genomics
    Genome Res., Vol. 18, No. 2. (1 February 2008), pp. 199-200.
    by Elliott H Margulies
    posted to genomics opinion by xingxu on 2008-02-01 19:14:40 as ** along with 4 people boudinot maximilianh treangen djkt
  • Qualifying the relationship between sequence conservation and molecular function
    Genome Res., Vol. 18, No. 2. (1 February 2008), pp. 201-205.
    by Gregory M Cooper, Christopher D Brown
    posted to genomics by xingxu on 2008-02-01 19:14:29 as ** along with 5 people bpcusack nklee aprasad brant djkt
  • Comparative genomics beyond sequence-based alignments: RNA structures in the ENCODE regions
    Genome Res., Vol. 18, No. 2. (1 February 2008), pp. 242-251.
    by Elfar Torarinsson, Zizhen Yao, Eric D Wiklund, Jesper B Bramsen, Claus Hansen, Jorgen Kjems, Niels Tommerup, Walter L Ruzzo, Jan Gorodkin
    posted to encode genomics rna_structure by xingxu on 2008-02-01 19:14:16 as ** along with 2 people djkt cabbagezs
  • Accurate Multiplex Polony Sequencing of an Evolved Bacterial Genome
    Science, Vol. 309, No. 5741. (09 September 2005), pp. 1728-1732.
    by Jay Shendure, Gregory J Porreca, Nikos B Reppas, Xiaoxia Lin, John P Mccutcheon, Abraham M Rosenbaum, Michael D Wang, Kun Zhang, Robi D Mitra, George M Church
    posted to genomics sequencing by xingxu on 2008-01-11 19:08:07 as ** along with 5 people and 2 groups arve balajis dchughes AaronDarling nhp G4ID Genetics-of-Gambling
  • The Diploid Genome Sequence of an Individual Human
    PLoS Biology, Vol. 5, No. 10. (1 October 2007), e254.
    by Samuel Levy, Granger Sutton, Pauline C Ng, Lars Feuk, Aaron L Halpern, Brian P Walenz, Nelson Axelrod, Jiaqi Huang, Ewen F Kirkness, Gennady Denisov, Yuan Lin, Jeffrey R Macdonald, Andy W Pang, Mary Shago, Timothy B Stockwell, Alexia Tsiamouri, Vineet Bafna, Vikas Bansal, Saul A Kravitz, Dana A Busam, Karen Y Beeson, Tina C Mcintosh, Karin A Remington, Josep F Abril, John Gill, Jon Borman, Yu-Hui Rogers, Marvin E Frazier, Stephen W Scherer, Robert L Strausberg, Craig J Venter
    posted to genomics individual sequencing by xingxu on 2007-12-27 01:48:09 as ** along with 17 people and 1 group operon carlblesius bpb balicea skhadar dullhunk djkt jackjackjjj ramensky massivemayhem jasonbobe PredictER lp2 cabbagezs hpaces maburkitt nhp Bioinformatics
  • Population Genomics: Whole-Genome Analysis of Polymorphism and Divergence in Drosophila simulans
    PLoS Biology, Vol. 5, No. 11. (1 November 2007), e310.
    by David J Begun, Alisha K Holloway, Kristian Stevens, Ladeana W Hillier, Yu-Ping Poh, Matthew W Hahn, Phillip M Nista, Corbin D Jones, Andrew D Kern, Colin N Dewey, Lior Pachter, Eugene Myers, Charles H Langley
    posted to drosophila genomics population variability by xingxu on 2007-12-27 01:46:01 as ** along with 3 people and 3 groups Neeperando cwbrown caseybrown Notre Dame Bioinformatics Computational-Genomics EisenLab
  • Mapping the C. elegans noncoding transcriptome with a whole-genome tiling microarray
    Genome Res. (4 September 2007), gr.6611807.
    by Housheng He, Jie Wang, Tao Liu, Shirley X Liu, Tiantian Li, Yunfei Wang, Zuwei Qian, Haixia Zheng, Xiaopeng Zhu, Tao Wu, Baochen Shi, Wei Deng, Wei Zhou, Geir Skogerbo, Runsheng Chen
    posted to genomics microarray nematode tiling transcriptome by xingxu on 2007-12-27 01:13:23 as ** along with 2 people cabbagezs blobbybirdman
  • Adaptive Gene Expression Divergence Inferred from Population Genomics
    PLoS Genetics, Vol. 3, No. 10. (1 October 2007), e187.
    by Alisha K Holloway, Mara K Lawniczak, Jason G Mezey, David J Begun, Corbin D Jones
    posted to evolution expression genomics population by xingxu on 2007-12-27 00:50:14 as ** along with 5 people brant Garamonfok caseybrown sb_journal_club emptyhb
  • The human disease network
    PNAS, Vol. 104, No. 21. (22 May 2007), pp. 8685-8690.
    by Kwang-Il Goh, Michael E Cusick, David Valle, Barton Childs, Marc Vidal, Albert-Laszlo Barabasi
    posted to bioinformatics genomics interactions by xingxu on 2007-12-04 18:15:08 as ** along with 24 people and 8 groups yaredo shoshin carlk mingzhi Yanno jyuh aalibes cannin kuhn jfr yas balicea neveaire bundschu raiyar grahamc joepickrell leSyl henning dejori winterschlaefer naegele shikin nolodie GomezLab Biostatistics Computational-Genomics Bioinformatics Neuroscience steinmetzlab ic4 generif_paper
  • Evolutionary developmental biology and genomics
    Nature Reviews Genetics, Vol. 8, No. 12., pp. 932-942.
    by Cristian Cañestro, Hayato Yokoi, John H Postlethwait
    posted to development evolution genomics review by xingxu on 2007-12-04 18:10:02 as ** along with 2 people dchughes maximilianh
  • Epistasis between deleterious mutations and the evolution of recombination
    Trends in Ecology & Evolution, Vol. In Press, Corrected Proof
    by Roger D Kouyos, Olin K Silander, Sebastian Bonhoeffer
    posted to epistasis evolution genomics recombination by xingxu on 2007-11-29 03:44:56 as ** along with 2 people and 2 groups dchughes zwang G4ID Genetics-of-Gambling
  • The Genomic Landscapes of Human Breast and Colorectal Cancers.
    Science (11 October 2007)
    by Laura D D Wood, D Williams W Parsons, Siân Jones, Jimmy Lin, Tobias Sjöblom, Rebecca J J Leary, Dong Shen, Simina M M Boca, Thomas Barber, Janine Ptak, Natalie Silliman, Steve Szabo, Zoltan Dezso, Vadim Ustyanksky, Tatiana Nikolskaya, Yuri Nikolsky, Rachel Karchin, Paul A A Wilson, Joshua S S Kaminker, Zemin Zhang, Randal Croshaw, Joseph Willis, Dawn Dawson, Michail Shipitsin, James K V K Willson, Saraswati Sukumar, Kornelia Polyak, Ben Ho H Park, Charit L L Pethiyagoda, P V Krishna V Pant, Dennis G G Ballinger, Andrew B B Sparks, James Hartigan, Douglas R R Smith, Erick Suh, Nickolas Papadopoulos, Phillip Buckhaults, Sanford D D Markowitz, Giovanni Parmigiani, Kenneth W W Kinzler, Victor E E Velculescu, Bert Vogelstein
    posted to breast cancer colon genomics by xingxu on 2007-11-29 03:42:15 as ** along with 13 people and 1 group cerami gwenknight jyuh tmmurali jfr rdiaz eisei ramensky massivemayhem bioyang cabbagezs shikin renatomilani VUMCGenomics
  • Relative Impact of Nucleotide and Copy Number Variation on Gene Expression Phenotypes
    Science, Vol. 315, No. 5813. (9 February 2007), pp. 848-853.
    by Barbara E Stranger, Matthew S Forrest, Mark Dunning, Catherine E Ingle, Claude Beazley, Natalie Thorne, Richard Redon, Christine P Bird, Anna de Grassi, Charles Lee, Chris Tyler-Smith, Nigel Carter, Stephen W Scherer, Simon Tavare, Panagiotis Deloukas, Matthew E Hurles, Emmanouil T Dermitzakis
    posted to cnv expression genomics by xingxu on 2007-11-29 03:40:57 as ** along with 12 people and 3 groups jyuh jfr dpollard balicea rdiaz qfwills djkt vplagnol shigepong jlangdon cisevol caseybrown Bioinformatics EisenLab cis-regulatory-evolution
  • Haplotype Block Structure Is Conserved across Mammals
    PLoS Genetics, Vol. 2, No. 7. (1 July 2006), e121.
    by Victor Guryev, Bart M Smits, Jose van de Belt, Mark Verheul, Norbert Hubner, Edwin Cuppen
    posted to genomics by xingxu on 2007-10-04 21:46:09 as **
  • Signatures of Positive Selection in Genes Associated with Human Skin Pigmentation as Revealed from Analyses of Single Nucleotide Polymorphisms
    Annals of Human Genetics, Vol. 0, No. 0. (0000), pp. ???-???.
    by O Lao, JM de Gruijter, K van Duijn, A Navarro, M Kayser
    posted to genomics selection by xingxu on 2007-10-04 21:45:57 as ** along with 3 people larios JBEgwa01 jasonbobe
  • The molecular signature of selection underlying human adaptations
    American Journal of Physical Anthropology, Vol. 131, No. S43. (2006), pp. 89-130.
    by Eugene E Harris, Diogo Meyer
    posted to genomics selection by xingxu on 2007-10-04 21:45:41 as ** along with 1 person and 1 group mjlaye Fasting, food and evolution
  • A New Approach for Using Genome Scans to Detect Recent Positive Selection in the Human Genome.
    PLoS Biol, Vol. 5, No. 7. (19 June 2007)
    by Kun Tang, Kevin R R Thornton, Mark Stoneking
    posted to genomics selection by xingxu on 2007-10-04 21:45:32 as ** along with 4 people and 3 groups brant dchughes madhadron sebastien_vigneau EisenLab G4ID Genetics-of-Gambling
  • Large-scale analysis of pseudogenes in the human genome
    Current Opinion in Genetics & Development, Vol. 14, No. 4. (August 2004), pp. 328-335.
    by Zhaolei Zhang, Mark Gerstein
    posted to genomics pseudogene by xingxu on 2007-08-17 17:29:57 as **
  • High-throughput oncogene mutation profiling in human cancer
    Nature Genetics, Vol. 39, No. 3. (11 February 2007), pp. 347-351.
    by Roman K Thomas, Alissa C Baker, Ralph M Debiasi, Wendy Winckler, Thomas Laframboise, William M Lin, Meng Wang, Whei Feng, Thomas Zander, Laura E Macconnaill, Jeffrey C Lee, Rick Nicoletti, Charlie Hatton, Mary Goyette, Luc Girard, Kuntal Majmudar, Liuda Ziaugra, Kwok-Kin Wong, Stacey Gabriel, Rameen Beroukhim, Michael Peyton, Jordi Barretina, Amit Dutt, Caroline Emery, Heidi Greulich, Kinjal Shah, Hidefumi Sasaki, Adi Gazdar, John Minna, Scott A Armstrong, Ingo K Mellinghoff, Stephen F Hodi, Glenn Dranoff, Paul S Mischel, Tim F Cloughesy, Stan F Nelson, Linda M Liau, Kirsten Mertz, Mark A Rubin, Holger Moch, Massimo Loda, William Catalona, Jonathan Fletcher, Sabina Signoretti, Frederic Kaye, Kenneth C Anderson, George D Demetri, Reinhard Dummer, Stephan Wagner, Meenhard Herlyn, William R Sellers, Matthew Meyerson, Levi A Garraway
    posted to genomics mutation sequencing by xingxu on 2007-08-17 16:51:32 as ** along with 4 people and 1 group cerami jfr aviad_work ealloza BioinfoCIPF
  • Genome-wide variation and identification of vaccine targets in the Plasmodium falciparum genome
    Nature Genetics, Vol. 39, No. 1. (10 December 2006), pp. 126-130.
    by Jianbing Mu, Philip Awadalla, Junhui Duan, Kate M Mcgee, Jon Keebler, Karl Seydel, Gilean AT Mcvean, Xin-Zhuan Su
    posted to genomics malaria by xingxu on 2007-08-17 16:49:51 as ** along with 5 people smbe2008 fernan becarmson shigepong GeeSharpMinor
  • Genome variation and evolution of the malaria parasite Plasmodium falciparum.
    Nat Genet (10 December 2006)
    by Daniel C C Jeffares, Arnab Pain, Andrew Berry, Anthony V V Cox, James Stalker, Catherine E E Ingle, Alan Thomas, Michael A A Quail, Kyle Siebenthall, Anne-Catrin C Uhlemann, Sue Kyes, Sanjeev Krishna, Chris Newbold, Emmanouil T T Dermitzakis, Matthew Berriman
    posted to genomics malaria by xingxu on 2007-08-17 16:49:46 as ** along with 4 people Neeperando aswin fernan shung
  • A genome-wide map of diversity in Plasmodium falciparum.
    Nat Genet (10 December 2006)
    by Sarah K K Volkman, Pardis C C Sabeti, David Decaprio, Daniel E E Neafsey, Stephen F F Schaffner, Danny A A Milner, Johanna P P Daily, Ousmane Sarr, Daouda Ndiaye, Omar Ndir, Soulyemane Mboup, Manoj T T Duraisingh, Amanda Lukens, Alan Derr, Nicole Stange-Thomann, Skye Waggoner, Robert Onofrio, Liuda Ziaugra, Evan Mauceli, Sante Gnerre, David B B Jaffe, Joanne Zainoun, Roger C C Wiegand, Bruce W W Birren, Daniel L L Hartl, James E E Galagan, Eric S S Lander, Dyann F F Wirth
    posted to genomics malaria by xingxu on 2007-08-17 16:49:40 as ** along with 4 people jasonflannick aswin fernan shung
  • Rates of Genome Evolution and Branching Order from Whole Genome Analysis
    Mol Biol Evol, Vol. 24, No. 8. (1 August 2007), pp. 1722-1730.
    by Gavin A Huttley, Matthew J Wakefield, Simon Easteal
    posted to evolution genomics by xingxu on 2007-08-07 20:38:40 as ** along with 2 people and 2 groups operon dchughes G4ID Genetics-of-Gambling
  • Leishmania major Friedlin chromosome 1 has an unusual distribution of protein-coding genes
    PNAS, Vol. 96, No. 6. (16 March 1999), pp. 2902-2906.
    by Peter J Myler, Lindsey Audleman, Theo Devos, Greg Hixson, Patti Kiser, Craig Lemley, Charles Magness, Erika Rickel, Ellen Sisk, Susan Sunkin, Steven Swartzell, Thomas Westlake, Patrick Bastien, Guoliang Fu, Alasdair Ivens, Kenneth Stuart
    posted to genomics kinetoplastid leishmania parasitology by xingxu on 2007-08-07 17:20:51 as **
  • Comparative genomic analysis of three Leishmania species that cause diverse human disease
    Nature Genetics, Vol. 39, No. 7. (17 June 2007), pp. 839-847.
    by Christopher S Peacock, Kathy Seeger, David Harris, Lee Murphy, Jeronimo C Ruiz, Michael A Quail, Nick Peters, Ellen Adlem, Adrian Tivey, Martin Aslett, Arnaud Kerhornou, Alasdair Ivens, Audrey Fraser, Marie-Adele Rajandream, Tim Carver, Halina Norbertczak, Tracey Chillingworth, Zahra Hance, Kay Jagels, Sharon Moule, Doug Ormond, Simon Rutter, Rob Squares, Sally Whitehead, Ester Rabbinowitsch, Claire Arrowsmith, Brian White, Scott Thurston, Frédéric Bringaud, Sandra L Baldauf, Adam Faulconbridge, Daniel Jeffares, Daniel P Depledge, Samuel O Oyola, James D Hilley, Loislene O Brito, Luiz RO Tosi, Barclay Barrell, Angela K Cruz, Jeremy C Mottram, Deborah F Smith, Matthew Berriman
    posted to genomics kinetoplastid leishmania parasitology by xingxu on 2007-08-07 16:58:46 as ****
  • A high-resolution map of transcription in the yeast genome
    PNAS, Vol. 103, No. 14. (4 April 2006), pp. 5320-5325.
    by Lior David, Wolfgang Huber, Marina Granovskaia, Joern Toedling, Curtis J Palm, Lee Bofkin, Ted Jones, Ronald W Davis, Lars M Steinmetz
    posted to genomics yeast by xingxu on 2007-08-01 22:03:57 as *** along with 7 people and 2 groups chasmand tuck alexg eckart_bindewald dpollard entropy raiyar EisenLab steinmetzlab
  • notes Biological function of unannotated transcription during the early development of Drosophila melanogaster
    Nature Genetics, Vol. 38, No. 10. (03 September 2006), pp. 1151-1158.
    by Robert J Manak, Sujit Dike, Victor Sementchenko, Philipp Kapranov, Frederic Biemar, Jeff Long, Jill Cheng, Ian Bell, Srinka Ghosh, Antonio Piccolboni, Thomas R Gingeras
    posted to affymetrix drosophila genomics race by xingxu on 2007-08-01 22:01:48 as read along with 5 people and 6 groups dpollard neveaire djkt wrowell Stew Biostatistics Computational-Genomics Bioinformatics EisenLab Neuroscience Cline_lab
  • notes Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions
    Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 746-759.
    by France Denoeud, Philipp Kapranov, Catherine Ucla, Adam Frankish, Robert Castelo, Jorg Drenkow, Julien Lagarde, Tyler Alioto, Caroline Manzano, Jacqueline Chrast, Sujit Dike, Carine Wyss, Charlotte N Henrichsen, Nancy Holroyd, Mark C Dickson, Ruth Taylor, Zahra Hance, Sylvain Foissac, Richard M Myers, Jane Rogers, Tim Hubbard, Jennifer Harrow, Roderic Guigo, Thomas R Gingeras, Stylianos E Antonarakis, Alexandre Reymond
    posted to encode genomics race by xingxu on 2007-08-01 21:59:55 as read along with 4 people and 1 group jasonflannick djkt olympos ghattem Bioinformatics
  • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
    Nature, Vol. 447, No. 7146. (14 June 2007), pp. 799-816.
    posted to affymetrix encode genomics race by xingxu on 2007-08-01 21:32:45 as read along with 22 people and 2 groups jasonflannick ep161302 jyuh cmmorel dpollard ilh djkt plofje ramensky joepickrell massivemayhem fishtank Garamonfok jmuhlich bioyang cabbagezs antonkratz mimulus_99 julianjonker gjuggler drbal maralena EisenLab SorgerLab
  • The Consensus Coding Sequences of Human Breast and Colorectal Cancers
    Science, Vol. 314, No. 5797. (7 September 2006), pp. 268-274.
    by Tobias Sjoblom, Sian Jones, Laura D Wood, Williams D Parsons, Jimmy Lin, Thomas Barber, Diana Mandelker, Rebecca J Leary, Janine Ptak, Natalie Silliman, Steve Szabo, Phillip Buckhaults, Christopher Farrell, Paul Meeh, Sanford D Markowitz, Joseph Willis, Dawn Dawson, James K Willson, Adi F Gazdar, James Hartigan, Leo Wu, Changsheng Liu, Giovanni Parmigiani, Ben H Park, Kurtis E Bachman, Nickolas Papadopoulos, Bert Vogelstein, Kenneth W Kinzler, Victor E Velculescu
    posted to breast colon genomics mutations by xingxu on 2007-08-01 21:32:07 as read along with 18 people and 1 group frohike chrisamiller mingzhi aalibes bicko jfr tuck balajis nickluscombe rdiaz eisei jackjackjjj vicsta jtaylor emb51 ramensky massivemayhem cerami EBI-regulation
  • A Comprehensive Analysis of Common Copy-Number Variations in the Human Genome
    American Journal of Human Genetics (January 2007)
    by Wong
    posted to cnv genomics myc by xingxu on 2007-08-01 21:30:32 as read
  • Global variation in copy number in the human genome
    Nature, Vol. 444, No. 7118. (23 November 2006), pp. 444-454.
    by Richard Redon, Shumpei Ishikawa, Karen R Fitch, Lars Feuk, George H Perry, Daniel T Andrews, Heike Fiegler, Michael H Shapero, Andrew R Carson, Wenwei Chen, Eun K Cho, Stephanie Dallaire, Jennifer L Freeman, Juan R Gonzalez, Monica Gratacos, Jing Huang, Dimitrios Kalaitzopoulos, Daisuke Komura, Jeffrey R Macdonald, Christian R Marshall, Rui Mei, Lyndal Montgomery, Kunihiro Nishimura, Kohji Okamura, Fan Shen, Martin J Somerville, Joelle Tchinda, Armand Valsesia, Cara Woodwark, Fengtang Yang, Junjun Zhang, Tatiana Zerjal, Jane Zhang, Lluis Armengol, Donald F Conrad, Xavier Estivill, Chris Tyler-Smith, Nigel P Carter, Hiroyuki Aburatani, Charles Lee, Keith W Jones, Stephen W Scherer, Matthew E Hurles
    posted to cnv genomics hapmap by xingxu on 2007-08-01 21:25:01 as read along with 25 people and 6 groups pradiptaray daed Ema srp33 bpb jfr balajis