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yas library [411 articles]

Статьи, недавно добавленные в библиотеку yas .
  • PubMed related articles: a probabilistic topic-based model for content similarity
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Jimmy Lin, John W Wilbur
    posted to text-mining by yas on 2008-05-14 10:04:32 as ** along with 6 people jyuh dullhunk msampson Gaetan barriot A_Hoogendam
  • Constructing biological networks through combined literature mining and microarray analysis: a LMMA approach.
    Bioinformatics, Vol. 22, No. 17. (1 September 2006), pp. 2143-2150.
    by S Li, L Wu, Z Zhang
    posted to microarray text-mining by yas on 2008-02-26 09:38:27 as ** along with 1 person jyuh
  • Functional profiling of microarray experiments using text-mining derived bioentities
    Bioinformatics, Vol. 23, No. 22. (15 November 2007), pp. 3098-3099.
    by Pablo Minguez, Fatima Al-Shahrour, David Montaner, Joaquin Dopazo
    posted to microarray text-mining by yas on 2008-02-26 09:35:33 as ** along with 3 people jyuh heliopais dmontaner
  • A language modeling approach to information retrieval
    (1998), pp. 275-281.
    by Jay M Ponte, Bruce B Croft
    posted to information-retrieval by yas on 2008-02-03 15:40:46 as ** along with 7 people and 5 groups A_Olympia deanliao arjen katja ransombriggs dah44 abellogin Philosophy_of_Information Blog_and_Wiki_Research social_navigation ilps ahat
  • Getting Started in Text Mining
    PLoS Computational Biology, Vol. 4, No. 1. (1 January 2008), e20.
    by Bretonnel K Cohen, Lawrence Hunter
    posted to review text-mining by yas on 2008-02-01 11:43:33 as ** along with 12 people and 1 group quianominorleo TheresaNiederberger ulmer jyuh y4su0 dullhunk hpiwowar sebastien_vigneau shigepong cjeans wchapman sci91078 dbmi-nlp
  • Induction of pluripotent stem cells from adult human fibroblasts by defined factors.
    Cell, Vol. 131, No. 5. (30 November 2007), pp. 861-872.
    by K Takahashi, K Tanabe, M Ohnuki, M Narita, T Ichisaka, K Tomoda, S Yamanaka
    posted to biomedical by yas on 2008-01-29 16:04:18 as ** along with 6 people and 1 group jyuh stevezhang tmmurali balicea wsjames shayashi Oxford Virology
  • Frontiers of biomedical text mining: current progress
    Brief Bioinform (30 October 2007), bbm045.
    by Pierre Zweigenbaum, Dina Demner-Fushman, Hong Yu, Kevin B Cohen
    posted to text-classification by yas on 2008-01-17 06:31:30 as ** along with 6 people and 1 group TheresaNiederberger yggdrasil jyuh dullhunk hpiwowar wchapman dbmi-nlp
  • Text processing through Web services: Calling Whatizit
    Bioinformatics (15 November 2007), btm557.
    by Dietrich Rebholz-Schuhmann, Miguel Arregui, Sylvain Gaudan, Harald Kirsch, Antonio J Yepes
    posted to text-mining web-service by yas on 2008-01-15 04:31:36 as ** along with 4 people jyuh dullhunk Gaetan adoms
  • Finding GeneRIFs via gene ontology annotations.
    Pac Symp Biocomput (2006), pp. 52-63.
    by Z Lu, KB Cohen, L Hunter
    posted to summarization by yas on 2008-01-08 22:35:45 as **
  • Semantic retrieval for the accurate identification of relational concepts in massive textbases
    (2006), pp. 1017-1024.
    by Yusuke Miyao, Tomoko Ohta, Katsuya Masuda, Yoshimasa Tsuruoka, Kazuhiro Yoshida, Takashi Ninomiya, Jun'ichi Tsujii
    posted to information-extraction information-retrieval nlp by yas on 2008-01-08 22:32:23 as ** along with 1 person mircea
  • An intelligent search engine and GUI-based efficient MEDLINE search tool based on deep syntactic parsing
    (2006), pp. 17-20.
    by Tomoko Ohta, Yoshimasa Tsuruoka, Jumpei Takeuchi, Jin-Dong Kim, Yusuke Miyao, Akane Yakushiji, Kazuhiro Yoshida, Yuka Tateisi, Takashi Ninomiya, Katsuya Masuda, Tadayoshi Hara, Jun'ichi Tsujii
    posted to nlp web-service by yas on 2008-01-08 22:30:55 as ** along with 1 person mircea
  • Integrating probabilistic extraction models and data mining to discover relations and patterns in text
    (2006), pp. 296-303.
    by Aron Culotta, Andrew Mccallum, Jonathan Betz
    posted to machine-learning text-mining by yas on 2008-01-08 22:05:35 as ** along with 2 people and 2 groups AlisonBabeu dejori ic4 generif_paper
  • Corpus annotation for mining biomedical events from literature
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Jin D Kim, Tomoko Ohta, Jun'ichi Tsujii
    posted to corpus by yas on 2008-01-08 19:26:36 as ** along with 8 people and 2 groups jyuh dullhunk bhaddow sobolevnrm gmonce vlachmore wchapman mircea baker-group dbmi-nlp
  • MILANO - custom annotation of microarray results using automatic literature searches
    BMC Bioinformatics, Vol. 6, No. 1. (2005)
    by Ran Rubinstein, Itamar Simon
    posted to literature-based-annotation microarray by yas on 2008-01-07 09:35:01 as ** along with 1 person and 1 group bundschu generif_paper
  • Identifying gene and protein mentions in text using conditional random fields.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by R McDonald, F Pereira
    posted to ner by yas on 2008-01-07 09:27:56 as ** along with 4 people and 1 group bundschu bhaddow johnkork gmonce generif_paper
  • The human disease network
    PNAS, Vol. 104, No. 21. (22 May 2007), pp. 8685-8690.
    by Kwang-Il Goh, Michael E Cusick, David Valle, Barton Childs, Marc Vidal, Albert-Laszlo Barabasi
    posted to gene-expression genotype-phenotype by yas on 2008-01-07 09:12:18 as ** along with 21 people and 8 groups mingzhi Yanno jyuh aalibes cannin kuhn jfr balicea neveaire bundschu raiyar grahamc joepickrell leSyl henning dejori xingxu winterschlaefer naegele shikin nolodie GomezLab Biostatistics Computational-Genomics Bioinformatics Neuroscience steinmetzlab ic4 generif_paper
  • Next-generation sequencing transforms today's biology
    Nature Methods, Vol. 5, No. 1. (19 December 2007), pp. 16-18.
    by Stephan C Schuster
    posted to genome by yas on 2008-01-06 00:19:15 as ** along with 3 people jyuh balicea xingxu
  • Efficient HPSG Parsing with Supertagging and CFG-Filtering.
    (2007), pp. 1671-1676.
    by Takuya Matsuzaki, Yusuke Miyao, Jun I Tsujii
    edited by Manuela M Veloso
    posted to nlp by yas on 2007-11-05 07:08:07 as **
  • Automatic extraction of gene/protein biological functions from biomedical text
    Bioinformatics, Vol. 21, No. 7. (01 April 2005), pp. 1227-1236.
    by Koike Asako, Niwa Yoshiki, Takagi Toshihisa
    posted to information-extraction by yas on 2007-11-05 06:56:26 as ** along with 3 people and 2 groups irenas helliontroy gaudan dbk-lab biomedical-nlp
  • [Computational analyses of biomedical literature for understanding living organisms]
    Tanpakushitsu Kakusan Koso, Vol. 50, No. 16 Suppl. (December 2005), pp. 2244-2249.
    by Y Yamamoto, T Takagi
    posted to review text-mining by yas on 2007-11-05 06:14:51 as **
  • Automatic construction of knowledge base from biological papers.
    Proc Int Conf Intell Syst Mol Biol, Vol. 5 (1997), pp. 218-225.
    by Y Ohta, Y Yamamoto, T Okazaki, I Uchiyama, T Takagi
    posted to information-extraction information-retrieval nlp by yas on 2007-11-05 06:11:20 as **
  • Human disease classification in the postgenomic era: A complex systems approach to human pathobiology
    Mol Syst Biol, Vol. 3 (10 July 2007)
    by Joseph Loscalzo, Isaac Kohane, Albert-Laszlo Barabasi
    posted to systems-biology by yas on 2007-11-04 09:09:05 as ** along with 6 people and 2 groups Yanno kentsis jfr dchughes zwang nolodie G4ID Genetics-of-Gambling
  • Systems biology. Life's complexity pyramid.
    Science, Vol. 298, No. 5594. (25 October 2002), pp. 763-764.
    by ZN Oltvai, AL Barabási
    posted to systems-biology by yas on 2007-11-04 09:02:35 as ** along with 7 people and 6 groups eldan wnpx sameetmehta jwdietrich mattjb franklin Ema MathBio Cybernetics ComplexAdaptiveSystems DSTO-CAS Biomedical_Cybernetics AQUA-FONTIS-Study
  • Representing, storing and accessing molecular interaction data: a review of models and tools.
    Brief Bioinform, Vol. 7, No. 4. (December 2006), pp. 331-338.
    by L Strömbäck, V Jakoniene, H Tan, P Lambrix
    posted to ontology by yas on 2007-11-04 08:20:30 as ** along with 4 people and 1 group balajis cjeans bootsy annacarina07 801
  • The hormone resistin links obesity to diabetes.
    Nature, Vol. 409, No. 6818. (18 January 2001), pp. 307-312.
    by CM Steppan, ST Bailey, S Bhat, EJ Brown, RR Banerjee, CM Wright, HR Patel, RS Ahima, MA Lazar
    posted to biomedical by yas on 2007-11-04 08:03:27 as **
  • Diabetes. The missing link with obesity?
    Nature, Vol. 409, No. 6818. (18 January 2001), pp. 292-293.
    by JS Flier
    posted to biomedical by yas on 2007-11-04 08:00:45 as **
  • Modelling cellular behaviour.
    Nature, Vol. 409, No. 6818. (18 January 2001), pp. 391-395.
    by D Endy, R Brent
    posted to systems-biology by yas on 2007-11-04 07:37:29 as ** along with 1 person Evangelia
  • Knowledge representation of signal transduction pathways.
    Bioinformatics, Vol. 17, No. 9. (September 2001), pp. 829-837.
    by K Fukuda, T Takagi
    posted to knowledge-sharing by yas on 2007-11-04 07:22:13 as ** along with 1 person tim
  • Biomedical knowledge navigation by literature clustering.
    J Biomed Inform, Vol. 40, No. 2. (April 2007), pp. 114-130.
    by Y Yamamoto, T Takagi
    posted to clustering by yas on 2007-11-04 07:12:57 as ** along with 1 person jyuh
  • Towards zoomable multidimensional maps of the cell
    Nature Biotechnology, Vol. 25, No. 5. (04 May 2007), pp. 547-554.
    by Zhenjun Hu, Joe Mellor, Jie Wu, Minoru Kanehisa, Joshua M Stuart, Charles Delisi
    posted to protein-protein-interactions systems-biology visualization by yas on 2007-11-02 03:14:40 as ** along with 5 people tmmurali kuhn cmmorel balajis dullhunk
  • Gene symbol disambiguation using knowledge-based profiles
    Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 1015-1022.
    by Xu, Hua, Fan, Jung-Wei, Hripcsak, George, Mendonca, A Eneida, Markatou, Marianthi
    posted to gene-protein-name wsd by yas on 2007-10-03 13:05:27 as ** along with 1 person jyuh
  • BioProber: Software System for Biomedical Relation Discovery from PubMed
    Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE (2006), pp. 5779-5782.
    by Hyunchul Jang, Jaesoo Lim, Joon-Ho Lim, Soo-Jun Park, Kyu-Chul Lee
    posted to nlp by yas on 2007-09-19 06:03:08 as ** along with 1 person and 1 group Barend T_lab
  • BIOSMILE: A semantic role labeling system for biomedical verbs using a maximum-entropy model with automatically generated template features
    BMC Bioinformatics, Vol. 8 (01 September 2007), 325.
    by Richard T Tsai, Wen-Chi Chou, Ying-Shan Su, Yu-Chun Lin, Cheng-Lung Sung, Hong-Jie Dai, Irene T Yeh, Wei Ku, Ting-Yi Sung, Wen-Lian Hsu
    posted to nlp by yas on 2007-09-11 09:48:52 as ** along with 3 people and 1 group jyuh mircea Barend T_lab
  • Web services in the life sciences
    Drug Discovery Today, Vol. 10, No. 12. (15 June 2005), pp. 865-871.
    by Vasa Curcin, Moustafa Ghanem, Yike Guo
    posted to text-mining web-service by yas on 2007-08-23 08:28:58 as ** along with 6 people and 2 groups LeightonP rdhyee nicklynch moborg fisherp Barend Blog_and_Wiki_Research T_lab
  • PubMed vs. HighWire Press: A head-to-head comparison of two medical literature search engines.
    Comput Biol Med, Vol. 37, No. 9. (September 2007), pp. 1252-1258.
    by TE Vanhecke, MA Barnes, J Zimmerman, S Shoichet
    posted to information-retrieval by yas on 2007-08-22 14:38:20 as ** along with 2 people and 1 group dullhunk Gaetan T_lab
  • Clustering Microarray-Derived Gene Lists through Implicit Literature Relationships.
    Bioinformatics (30 May 2007)
    by Mark F F Burkart, Jonathan D D Wren, Jason I I Herschkowitz, Charles M M Perou, Harold R R Garner
    posted to literature-based-discovery microarray by yas on 2007-08-15 15:23:38 as ** along with 5 people and 1 group jyuh jfr dullhunk ghattem Barend T_lab
  • OReFiL: an online resource finder for life sciences
    BMC Bioinformatics, Vol. 8 (06 August 2007), 287.
    by Yasunori Yamamoto, Toshihisa Takagi
    posted to database online-resource by yas on 2007-08-06 17:26:25 as ** along with 3 people and 1 group jyuh hpiwowar Gaetan T_lab
  • A domain-based approach to predict protein-protein interactions
    BMC Bioinformatics, Vol. 8 (13 June 2007), 199.
    by Mudita Singhal, Haluk Resat
    posted to protein-protein-interactions by yas on 2007-07-29 08:49:38 as ** along with 2 people and 2 groups grahamc phoenixzxl T_lab ParkinsonLab_at_MaRS
  • Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls
    Nature, Vol. 447, No. 7145. (7 June 2007), pp. 661-678.
    posted to biomedical genome by yas on 2007-07-29 06:15:33 as ** along with 17 people and 3 groups raiyar jyuh jfr hpiwowar larios vplagnol frohike qmwwallace joepickrell massivemayhem Garamonfok PredictER hms jo_davies psique caseybrown mcgannd parkinson's disease references Bioinformatics T_lab
  • A quantitative model for linking two disparate sets of articles in MEDLINE
    Bioinformatics (26 April 2007), btm161.
    by Vetle I Torvik, Neil R Smalheiser
    posted to literature-based-discovery by yas on 2007-07-24 07:45:14 as ** along with 4 people and 1 group Enro jyuh dullhunk florianleitner T_lab
  • Improved scoring of functional groups from gene expression data by decorrelating GO graph structure
    Bioinformatics, Vol. 22, No. 13. (1 July 2006), pp. 1600-1607.
    by Alexa, Adrian, Rahnenfuhrer, Jorg, Lengauer, Thomas
    posted to microarray ontology by yas on 2007-07-23 10:03:05 as ** along with 1 person and 2 groups ealloza T_lab BioinfoCIPF
  • Text-derived concept profiles support assessment of DNA microarray data for acute myeloid leukemia and for androgen receptor stimulation
    BMC Bioinformatics, Vol. 8 (18 January 2007), 14.
    by Rob Jelier, Guido Jenster, Lambert CJ Dorssers, Bas J Wouters, Peter JM Hendriksen, Barend Mons, Ruud Delwel, Jan A Kors
    posted to microarray text-mining by yas on 2007-07-23 08:03:36 as ** along with 4 people and 1 group jfr hpiwowar fisherp Barend T_lab
  • Gene name identification and normalization using a model organism database
    J. of Biomedical Informatics, Vol. 37, No. 6. (December 2004), pp. 396-410.
    by Alexander A Morgan, Lynette Hirschman, Marc Colosimo, Alexander S Yeh, Jeff B Colombe
    posted to ner by yas on 2007-07-20 12:37:31 as ** along with 4 people and 2 groups helliontroy bhaddow johnkork vlachmore T_lab biomedical-nlp
  • Evaluation of BioCreAtIvE assessment of task 2.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by C Blaschke, EA Leon, M Krallinger, A Valencia
    posted to information-extraction by yas on 2007-07-20 12:33:37 as ** along with 2 people and 2 groups helliontroy zlu T_lab biomedical-nlp
  • BioCreAtIvE task 1A: gene mention finding evaluation.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by A Yeh, A Morgan, M Colosimo, L Hirschman
    posted to information-extraction by yas on 2007-07-20 12:29:10 as ** along with 4 people and 2 groups caporaso helliontroy zlu johnkork T_lab biomedical-nlp
  • Data preparation and interannotator agreement: BioCreAtIvE task 1B.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by ME Colosimo, AA Morgan, AS Yeh, JB Colombe, L Hirschman
    posted to information-extraction by yas on 2007-07-20 12:28:27 as ** along with 4 people and 2 groups blackbart helliontroy zlu vlachmore T_lab biomedical-nlp
  • Overview of BioCreAtIvE task 1B: normalized gene lists.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by L Hirschman, M Colosimo, A Morgan, A Yeh
    posted to information-extraction by yas on 2007-07-20 12:27:19 as ** along with 4 people and 2 groups helliontroy zlu wbaumgar vlachmore T_lab biomedical-nlp
  • Overview of BioCreAtIvE: critical assessment of information extraction for biology.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by L Hirschman, A Yeh, C Blaschke, A Valencia
    posted to information-extraction by yas on 2007-07-20 12:25:50 as ** along with 5 people and 2 groups helliontroy bhaddow johnkork leechuck vlachmore T_lab biomedical-nlp
  • Personalized ranking: a contextual ranking approach
    (2007), pp. 506-510.
    by Gae-Won You, Seung-Won Hwang
    posted to context-based information-retrieval by yas on 2007-07-12 03:53:38 as ** along with 3 people and 1 group ctl ianturton diogomartins T_lab
  • uBioRSS: Tracking Taxonomic Literature Using RSS.
    Bioinformatics (28 March 2007)
    by Patrick R R Leary, David P P Remsen, Catherine N N Norton, David J J Patterson, Indra Neil N Sarkar
    posted to software taxonomy by yas on 2007-06-21 13:16:23 as ** along with 3 people and 4 groups BragilMassoud jyuh kehan biodiversity_conservation Bioinformatics T_lab GrassBase
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